LGPLv2+ and LGPLv2+ with exceptions and GPLv2+ and GPLv2+ with exceptions and BSD and Inner-Net-2.0 and ISC and Public Domain and GFDL-1.3-only
The GNU C Library project provides the core libraries for the GNU system and GNU/Linux systems, as well as many other systems that use Linux as the kernel. These libraries provide critical APIs including ISO C11, POSIX.1-2008, BSD, OS-specific APIs and more. These APIs include such foundational facilities as open, read, write, malloc, printf, getaddrinfo, dlopen, pthread_create, crypt, login, exit and more.
acquired package info from repodata DB: repodata/e30d7685744a7c83e00e34883b4caa13098c6dd4580c70b9313f50e8b8c0aee4-primary.sqlite.bz2
bzip2 is a freely available, patent free, high-quality data compressor. It typically compresses files to within 10% to 15% of the best available techniques (the PPM family of statistical compressors), whilst being around twice as fast at compression and six times faster at decompression.
Libraries for decoding files compressed with LZMA or XZ utils.
Zlib is a free, general-purpose, not covered by any patents, lossless data-compression library for use on virtually any computer hardware and operating system. The zlib data format is itself portable across platforms.
Includes the popular tabix indexer, which indexes both .tbi and .csi formats, the htsfile identifier tool, and the bgzip compression utility.
C library for high-throughput sequencing data formats
HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM, CRAM and VCF, used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang. HTSlib implements a generalized BAM index, with file extension .csi ( coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent.